AUTHORS
bil/FR/Build.pm
bioperl/Bio/AnnotatableI.pm
bioperl/Bio/Annotation/Collection.pm
bioperl/Bio/Annotation/Comment.pm
bioperl/Bio/Annotation/DBLink.pm
bioperl/Bio/Annotation/Reference.pm
bioperl/Bio/Annotation/SimpleValue.pm
bioperl/Bio/Annotation/TypeManager.pm
bioperl/Bio/AnnotationCollectionI.pm
bioperl/Bio/AnnotationI.pm
bioperl/Bio/DB/HIV.pm
bioperl/Bio/DB/HIV/HIVAnnotProcessor.pm
bioperl/Bio/DB/HIV/HIVQueryHelper.pm
bioperl/Bio/DB/HIV/lanl-schema.xml
bioperl/Bio/DB/Query/HIVQuery.pm
bioperl/Bio/DB/QueryI.pm
bioperl/Bio/DB/RandomAccessI.pm
bioperl/Bio/DB/WebDBSeqI.pm
bioperl/Bio/DescribableI.pm
bioperl/Bio/Factory/FTLocationFactory.pm
bioperl/Bio/Factory/LocationFactoryI.pm
bioperl/Bio/Factory/ObjectBuilderI.pm
bioperl/Bio/Factory/ObjectFactoryI.pm
bioperl/Bio/Factory/SequenceFactoryI.pm
bioperl/Bio/Factory/SequenceStreamI.pm
bioperl/Bio/FeatureHolderI.pm
bioperl/Bio/IdentifiableI.pm
bioperl/Bio/Location/Atomic.pm
bioperl/Bio/Location/CoordinatePolicyI.pm
bioperl/Bio/Location/Fuzzy.pm
bioperl/Bio/Location/FuzzyLocationI.pm
bioperl/Bio/Location/Simple.pm
bioperl/Bio/Location/Split.pm
bioperl/Bio/Location/SplitLocationI.pm
bioperl/Bio/Location/WidestCoordPolicy.pm
bioperl/Bio/LocationI.pm
bioperl/Bio/PrimarySeq.pm
bioperl/Bio/PrimarySeqI.pm
bioperl/Bio/Range.pm
bioperl/Bio/RangeI.pm
bioperl/Bio/Root/Exception.pm
bioperl/Bio/Root/HTTPget.pm
bioperl/Bio/Root/IO.pm
bioperl/Bio/Root/Root.pm
bioperl/Bio/Root/RootI.pm
bioperl/Bio/Root/Version.pm
bioperl/Bio/Seq.pm
bioperl/Bio/Seq/SeqBuilder.pm
bioperl/Bio/Seq/SeqFactory.pm
bioperl/Bio/Seq/SeqFastaSpeedFactory.pm
bioperl/Bio/SeqI.pm
bioperl/Bio/SeqIO.pm
bioperl/Bio/SeqIO/fasta.pm
bioperl/Bio/SeqUtils.pm
bioperl/Bio/Tools/CodonTable.pm
bioperl/Bio/Tools/GuessSeqFormat.pm
bioperl/Bio/Tools/IUPAC.pm
bioperl/Bio/WebAgent.pm
Build.PL
Changes
INSTALL
INSTALL.WIN
lib/Bio/AnnotatableI.pm
lib/Bio/Annotation/Collection.pm
lib/Bio/Annotation/Comment.pm
lib/Bio/Annotation/DBLink.pm
lib/Bio/Annotation/Reference.pm
lib/Bio/Annotation/SimpleValue.pm
lib/Bio/Annotation/TypeManager.pm
lib/Bio/AnnotationCollectionI.pm
lib/Bio/AnnotationI.pm
lib/Bio/DB/HIV.pm
lib/Bio/DB/HIV/HIVAnnotProcessor.pm
lib/Bio/DB/HIV/HIVQueryHelper.pm
lib/Bio/DB/Query/HIVQuery.pm
lib/Bio/DB/QueryI.pm
lib/Bio/DB/RandomAccessI.pm
lib/Bio/DB/WebDBSeqI.pm
lib/Bio/DescribableI.pm
lib/Bio/Factory/FTLocationFactory.pm
lib/Bio/Factory/LocationFactoryI.pm
lib/Bio/Factory/ObjectBuilderI.pm
lib/Bio/Factory/ObjectFactoryI.pm
lib/Bio/Factory/SequenceFactoryI.pm
lib/Bio/Factory/SequenceStreamI.pm
lib/Bio/FeatureHolderI.pm
lib/Bio/IdentifiableI.pm
lib/Bio/Location/Atomic.pm
lib/Bio/Location/CoordinatePolicyI.pm
lib/Bio/Location/Fuzzy.pm
lib/Bio/Location/FuzzyLocationI.pm
lib/Bio/Location/Simple.pm
lib/Bio/Location/Split.pm
lib/Bio/Location/SplitLocationI.pm
lib/Bio/Location/WidestCoordPolicy.pm
lib/Bio/LocationI.pm
lib/Bio/PrimarySeq.pm
lib/Bio/PrimarySeqI.pm
lib/Bio/Range.pm
lib/Bio/RangeI.pm
lib/Bio/Root/Exception.pm
lib/Bio/Root/HTTPget.pm
lib/Bio/Root/IO.pm
lib/Bio/Root/Root.pm
lib/Bio/Root/RootI.pm
lib/Bio/Root/Version.pm
lib/Bio/Seq.pm
lib/Bio/Seq/SeqBuilder.pm
lib/Bio/Seq/SeqFactory.pm
lib/Bio/Seq/SeqFastaSpeedFactory.pm
lib/Bio/SeqI.pm
lib/Bio/SeqIO.pm
lib/Bio/SeqIO/fasta.pm
lib/Bio/SeqUtils.pm
lib/Bio/Tools/CodonTable.pm
lib/Bio/Tools/CodonTables.pm
lib/Bio/Tools/GuessSeqFormat.pm
lib/Bio/Tools/IUPAC.pm
lib/Bio/WebAgent.pm
LICENSE
MANIFEST			This list of files
README
scripts/hivq.PL
t/hivq.t
