- biosys2 : a
resurrected version of the classic precursor of PAUP*, as originally
written by Selander and Swofford, and
distributed by William C. Black IV. Recompiled in GNU FORTRAN and
refactored for modern datasets.
hivdbschema/1.0 : a set of XML
Schema files that formally describe the Los Alamos HIV Sequence
Database, used for organizing XML output to
a publicly available
Machine Image, loaded
with BioPerl and many
open-source bioinformatics tools.
bio::search::tiling : a suite of
BioPerl modules providing
global identity and conservation statistics by tiling high-scoring
pairs within BLAST/FASTA reports.
: an Emacs minor
mode for editing BioPerl code, with facilities for easy, menu-driven BioPerl
documentation browsing and reading on the fly while editing, and
several useful BioPerl code templates.
22 July 2009